Jean X. Gao, Ph.D.
Professor, FAIMBE
Computer Science and Engineering Department
University of Texas at Arlington
Email: gao AT uta.edu
Phone: 817-272-3628
Research Interests:
- Data Sciences, Machine Learning, Data Mining, and Pattern
Recognition
- Computational Biomedical Data Analysis and Bioinformatics
- Macro/Micro Medical Image Processing
- Computer Vision, Image Processing
Research Lab website:
Biomedical Computing and
Intelligent Systems Lab (BioMeCiS)
We have focused on developing efficient algorithms to solve
computational problems in basic medicine and clinics, while making
theoretical and fundamental contributions to machine learning,
artificial intelligence, statistical pattern recognition, and
computer vision.
Honors:
- Fellow, American Institute for Medical and Biological
Engineering (AIMBE), 2022
- Director's Award for Superior Accomplishment, National Science
Foundation (NSF), 2022
- Chair, Steering Committee, IEEE/ACM Transactions on
Computational Biology and Bioinformatics (IEEE/ACM TCBB), 2022
-.
- National Science
Foundation Early CAREER Award, 2006
- Outstanding Young Faculty Award, School of Engineering,
University of Texas at Arlington, 2007
- Research Excellence Award, Departmental Level, UTA, 2008, 2009
Education:
PhD, Electrical & Computer Engineering, Purdue University
MS, Biomedical Engineering, Rose-Hulman
Institute of Technology
BS, Biomedical Engineering, Shanghai
Medical University
(a six-year joint program with
Shanghai Jiaotong University)
Work Experience:
I
have joined National Institute Health (NIH) as a
program director under National Human Genome Research
Institute (NHGRI) from the spring of 2024 and I can be reached
by "jean.gao@nih.gov".
- Program Director, National Science
Foundation. (July 2019 - July 2023).
- Lead Program Director in charge
of the Innovation: Bioinformatics program in Division of
Biological Infrastructure (DBI).
- BIO/DBI Research Resource
Cluster coordinator (2022-2023).
- Along with other working group
members, initiated and published three new programs, MCA
(Mid-Career Advancement), D2R2 (Dark Dimensions for the RNA
Regulome), and POSE (Pathways to Enable Open Source
Ecosystems)
- Initiated and sponsored the
NSF-NIH Joint Workshop on Emerging AI for Biology.
- Full Professor, University of
Texas at Arlington, College of Science and Engineering. ( 2014 -
Present).
- Faculty Member, Joint Graduate
Studies Committee, Biomedical Engineering, University of Texas
at Arlington. (2007 - 2014).
- Associate Professor, University of
Texas at Arlington, Computer Science and Engineering. (2009 -
2014).
- Assistant Professor, University of
Texas at Arlington, Computer Science and Engineering. (2003 -
2009).
Publications:
Please check the
lab web page.
Teaching:
- CSE2315 Discrete Structure
Fall
- CSE5301 Data Analysis and Modeling
Spring
- CSE5370 Bioinformatics
Fall 2010
- CSE5367 Pattern
Recognition Spring 2011
- CSE6363 Machine Learning
Fall
- CSE5392.502 Bioinformatics
- CSE5392 Pattern Recognition and Decision
Making Processes
Major Research Community
Services:
Editorships and Editorial Boards
- Associate Editor, IEEE/ACM Transactions on
Computational Biology and Bioinformatics (TCBB), 2018 -
- Chair, Steering Committee, IEEE/ACM
Transactions on Computational Biology and Bioinformatics (TCBB),
2022 -
- Editorial board member, International
Journal of Data Mining and Bioinformatics (2008 - )
- Guest Editor, Elsevier Method, Special
Issue on Big Data Bioinformatics, vol. 114, 2016
- Guest Editor, Elsevier Computers in Biology
and Medicine, Vol. 64, 2015
- Guest Editor, IEEE Transactions on
Information Technology in Biomedicine, 2013
- Guest Editor, IEEE Transactions on
NanoBioScience, 2013
Advisory Panels
- IEEE Computer Society Representative on the
Steering Committee for IEEE/ACM Transactions on Computational
Biology and Bioinformatics (TCBB), 2018 -
- Chair of the EIC (Editor-in-Chief) Search
Committee for IEEE/ACM Transactions on Computational Biology and
Bioinformatics (TCBB), 2016
- Executive Committee Member and Secretary,
IEEE CS Technical Committee on Computational Life Sciences
(TCCLS) (2010-2015)
Organizers and Offices at
Professional Society
- Program co-Chair, IEEE International
Conference on Bioinformatics and Biomedicine (BIBM) (2017)
- Program co-Chair, IEEE International
Conference on Bioinformatics and Biomedicine (BIBM) (2012)
- Program co-Chair, IEEE International
Conference on Biomedical Engineering and Informatics (BMEI)
(2013)
- Publication Chair, IEEE HISB (Healthcare
Informatics, Imaging, and Systems Biology) conference, San Jose,
July , 2011, CA
- Bioinformatics Track Chair, 27th Southern
Biomedical Engineering Conference (SBEC), 2011
- Conference workshop general co-Chair, IEEE
International Conference on Bioinformatics and Biomedicine
(BIBM), 2008.
- Workshop Chair, Workshop on High-Throughput
Data Analysis for Proteomics and Genomics, in conjunction with
IEEE International Conference on Bioinformatics and Biomedicine
(BIBM), Nov 2-4, 2007.
Sponsors:
We gratefully acknowledge the
support from the following sponsors for our research:
- National
Science Foundation (NSF)
- National
Institutes of Health (NIH)
- American
Cancer Society (ACS)
Contact:
Computer Science and Engineering
Department
538 Engineering Research Building (ERB)
University of Texas at Arlington
500 UTA Boulevard
Arlington, TX 76019
Phone: (817)272-3628
Email: gao AT uta.edu
Office Hour:
Tue, Thu: 12:30pm
-- 1:30pm.
Mon, Wed, Fri: by appointment